Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931056.1_cds_XP_016477969.1_69647
CDS Infomation

[gene=LOC107799379] [db_xref=GeneID:107799379] [protein=formin-like protein 3] [protein_id=XP_016477969.1] [location=join(739..933,2160..2973,3074..3503,3600..3802,10824..11059,11911..12774)] [gbkey=CDS]
Sequence

ATGCCAAATACAATTAAAAGAAGACCAAAATATGGGATGAGCATTTTGATAATGGGAAGG
GTTGCCTATGCATTTGGTTTTGTCGCTTTGATTTGTGTTTGGGCAGCAAGAAATTCAGAA
GGGAATAGGAAGTTTCCGGGAAGCAATTTAGACATTGCAGGTCTTTGGCATGACCCTGTG
ATAGACGAAGATACGGCCGAGCAAGTATGGATCCACTGCAGGGAAGAGTTGGAAGAGAGC
ACAGAAGCTGCAAAATTTCTGGAATATTTTATTCAACAGGCAGCAACAGGAAGTTATAGT
TACTTAAAACAGGATATAGCTCTGTTGAAAAAAAGAACCTTACGGAAGGCTATTAAAGAT
TTGCCTCCCGAAGAGAAGCAGATTCTGTTGCAGTGCTTAAGAAGGAAAAATGTTCCGCTT
CATGTTTCTAATAGTGAGGATGCATCCAGTACTTGGTTTAGCAAGTACCAAGAGCTTTTC
TCGCAATGGTCCAGAGTTCCCAGGAGGTACCTAAGAGGAAGAAAGTATCCATTCATGCCA
ACAAATCATGCTCCAGTTCCAACTCTCGCTCCGTCTCCAGGTCCTGCAGCTGTTCCAACT
CTTGCTCCGTCTCCAGGTCCTGCAACAGTTCCAACTCTCGCTCCGTCTCCAGGCCCTGCA
ACTGTATCACCAATTTATGCTCCAGTTCCTTCTATTGAAGTGCCCACTAGCTCTCCTCCA
ATTTTTCAGCCTCCTTCTGCAGCTATAAAACCTCCTGAAATGCCTCCAAAACCTCAAATT
CACTCCAATTCTTCTAAACCTTTGCCTGTTCAACCTCCAGATAAACTACAGAATGGTCCT
AATTCTCCTGGAAATAATCAGGAGGGTCGAAATTATTTAATTGCTGTGGTGGCTGGATGT
TCTGTTGCAGGAATTGCCCTTTTATCTCTGTTGATATTATGTGTTAAGAATAAAAAGAAA
GAAATAACTCCAAACGATGGGCAAAGGGATGGAAAACAACCTCTGACAGGTTCTTCTCTA
AATGTCAAGAGTGCATCTGCAGTAACCAGTGCTGATCCTCATAATTCTTTCGAAGCAGAA
TCGAAACTATCAAAACCTGAGATGAATGCAAATGCTCATGCATCATTACCCCTTCCTCCA
GGAAAATCTGCACCTCCACCACCTAGTCCACCCCCACCTCCTCCTCCTAAACCGCCAGCT
CCAAGAGCACCTCCACCTCTAAAAGTTGTTCGCCCTCCTAATCCACCAAAACCTGGTATG
GCGAAGCCTTTACCTCTTGGAGCACATCAGAGAGGACGTTCTTCTGGGGATGGGGAAAGT
GACTCATTGGCTGAATCTGATGCTCCGAAAGCAAAATTAAAGCCATTCTTCTGGGACAAG
GTTCTTGCTAATCCTGATCACTCTATGGTTTGGCATGAAATAAAAGCCGGCTCATTCCAG
TTTAATGAGGAGATGATGGAGTCCTTATTCGGATATATACCGGTAGACCAAGGAAAAGAT
GATCGAAGAAAAGCTTCCTCATCCTTTGACCAAACCCCACAATATATTCAGATTATTGAT
GCTAAGAAATCACAGAATCTAGCAATTCTTCTCAGAGCCTTAAATGTGACAACAGAAGAA
GTTTATGATGCTCTCCATGAGGGTAATGAGCTGCCTCCTGAACTCCTACGAACTCTATTG
AAGATGGCACCAACAACAGATGAAGAACTAAAACTCAGATTGTTTGCTGGAGACATTTCT
CAGCTTGGTCCTGCTGAACGTTTTCTCAAGTCCATGGTTGCAGTTCCATTTGCCTTCAAA
CGGATGGAATCATTGTTGCTCATGAGTTCTCTTCAGGAAGAAGTTTCTTCCATTAAAGAG
TCCTTCACAACCTTGGAGGTCGCATGTAAGGAGCTGAGAAACAGCAGACTGTTCCTGAAA
CTTCTTGAAGCAGTTCTTAAGACTGGCAACCGCATGAACGATGGCACCTTCCGTGGTGGT
GCACAGGCATTCAAGCTTGACACACTTTTGAAACTATCAGATGTGAAAGGAACTGATGGC
AAGACCACACTCTTGAACTTTGTAGTGCAGGAAATTATTCGATCCGAAGGATTAAGAGCT
GCACGTAGATTAAGGGAGAAGCAAAGCACGTCCAATGTGAAGACAGAAGATCTTGTAGAG
GATCCTGCTCAGGATTCAGCAGATTATCATCGTAGCCTTGGTCTCCAGGTGGTTTCTGGT
TTAAGCAATGAGCTTGAGAACGTAAGAAAAGCATCACTTATTGATGGCGAGAACCTAAGT
GCAGCTGTCACCAAGCTTAGTCAGTCACTAGTGAAAACTAAAGAGTTTCTGGACACTGAT
ATGACAAGTTTGGAGGAAGACAGTAAGTTCCGTGATACTCTCACAAATTTTATCCAACAT
GCGGAACAGGAGATTACTTGGATACTAGAAGAAGAGAAGAGGATAATGTCTTTGGTTAAG
AACACAGGAGACTATTTCCATGAAAATGCAGGGAAGGATGAAGGCTTGCGTCTCTTTTCG
GTTGTTAGTGACTTCTTAATTATGCTGGACAAGGCATGTACTGTGGTGAGAAACTCAACA
AAAGTTCCAGCAAAGACTCCTACAAAAGGGACGGTAGCAACATCTCCTTCCCAAGAATCC
TGTCCTGAGTCTTTGCCAGACATACGTAAACGACTATTTCCTGCAATCCAGGAGCGACAT
ATGGGCGATTCTAGTTCAGATGAGGAGAGCTCAAGCCCGTAG

Peptide Sequence

PEP ID

XP_016477969.1
PEP Infomation

PREDICTED: formin-like protein 3 [Nicotiana tabacum]
Sequence

MPNTIKRRPKYGMSILIMGRVAYAFGFVALICVWAARNSEGNRKFPGSNLDIAGLWHDPV
IDEDTAEQVWIHCREELEESTEAAKFLEYFIQQAATGSYSYLKQDIALLKKRTLRKAIKD
LPPEEKQILLQCLRRKNVPLHVSNSEDASSTWFSKYQELFSQWSRVPRRYLRGRKYPFMP
TNHAPVPTLAPSPGPAAVPTLAPSPGPATVPTLAPSPGPATVSPIYAPVPSIEVPTSSPP
IFQPPSAAIKPPEMPPKPQIHSNSSKPLPVQPPDKLQNGPNSPGNNQEGRNYLIAVVAGC
SVAGIALLSLLILCVKNKKKEITPNDGQRDGKQPLTGSSLNVKSASAVTSADPHNSFEAE
SKLSKPEMNANAHASLPLPPGKSAPPPPSPPPPPPPKPPAPRAPPPLKVVRPPNPPKPGM
AKPLPLGAHQRGRSSGDGESDSLAESDAPKAKLKPFFWDKVLANPDHSMVWHEIKAGSFQ
FNEEMMESLFGYIPVDQGKDDRRKASSSFDQTPQYIQIIDAKKSQNLAILLRALNVTTEE
VYDALHEGNELPPELLRTLLKMAPTTDEELKLRLFAGDISQLGPAERFLKSMVAVPFAFK
RMESLLLMSSLQEEVSSIKESFTTLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGG
AQAFKLDTLLKLSDVKGTDGKTTLLNFVVQEIIRSEGLRAARRLREKQSTSNVKTEDLVE
DPAQDSADYHRSLGLQVVSGLSNELENVRKASLIDGENLSAAVTKLSQSLVKTKEFLDTD
MTSLEEDSKFRDTLTNFIQHAEQEITWILEEEKRIMSLVKNTGDYFHENAGKDEGLRLFS
VVSDFLIMLDKACTVVRNSTKVPAKTPTKGTVATSPSQESCPESLPDIRKRLFPAIQERH
MGDSSSDEESSSP

Transcript Sequence

Gene sequence data has not been registered.